Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.82□□□□□ -0.36
Abca1P41233 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Abca1P41233 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.82□□□□□ -0.36
Abca1P41233 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Abca1P41233 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.82□□□□□ -0.36
Abca1P41233 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Abca1P41233 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Abca1P41233 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Abca1P41233 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.82□□□□□ -0.36
Abca1P41233 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.81□□□□□ -0.36
Abca1P41233 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.81□□□□□ -0.36
Abca1P41233 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.81□□□□□ -0.36
Abca1P41233 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.81□□□□□ -0.36
Abca1P41233 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.81□□□□□ -0.36
Abca1P41233 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.81□□□□□ -0.36
Abca1P41233 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.81□□□□□ -0.36
Abca1P41233 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Abca1P41233 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Abca1P41233 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Abca1P41233 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.81□□□□□ -0.36
Abca1P41233 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Abca1P41233 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Abca1P41233 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.8□□□□□ -0.36
Abca1P41233 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.8□□□□□ -0.36
Abca1P41233 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.8□□□□□ -0.36
Abca1P41233 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.8□□□□□ -0.36
Abca1P41233 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Abca1P41233 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Abca1P41233 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Abca1P41233 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abca1P41233 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Gm13616-201ENSMUST00000120600 222 ntBASIC12.79□□□□□ -0.36
Abca1P41233 Gm23547-201ENSMUST00000158210 271 ntBASIC12.79□□□□□ -0.36
Abca1P41233 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.79□□□□□ -0.36
Abca1P41233 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.79□□□□□ -0.36
Abca1P41233 Gm36967-201ENSMUST00000193814 266 ntBASIC12.79□□□□□ -0.36
Abca1P41233 Gm45747-201ENSMUST00000212203 999 ntBASIC12.79□□□□□ -0.36
Abca1P41233 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.79□□□□□ -0.36
Abca1P41233 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms