Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sox6P40645 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sox6P40645 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.51□□□□□ -0.09
Sox6P40645 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Sox6P40645 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sox6P40645 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sox6P40645 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Sox6P40645 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sox6P40645 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox6P40645 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox6P40645 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sox6P40645 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sox6P40645 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.5□□□□□ -0.09
Sox6P40645 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Sox6P40645 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Sox6P40645 Gm21362-201ENSMUST00000194272 928 ntBASIC14.5□□□□□ -0.09
Sox6P40645 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sox6P40645 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sox6P40645 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox6P40645 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Sox6P40645 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.49□□□□□ -0.09
Sox6P40645 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Sox6P40645 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Sox6P40645 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Gm15794-201ENSMUST00000120182 631 ntBASIC14.49□□□□□ -0.09
Sox6P40645 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.49□□□□□ -0.09
Sox6P40645 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Sox6P40645 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Sox6P40645 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.49□□□□□ -0.09
Sox6P40645 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.49□□□□□ -0.09
Sox6P40645 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms