Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.86■□□□□ 0.29
Sox5P35710 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox5P35710 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox5P35710 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox5P35710 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sox5P35710 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox5P35710 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox5P35710 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox5P35710 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox5P35710 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox5P35710 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Sox5P35710 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sox5P35710 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sox5P35710 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sox5P35710 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sox5P35710 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.85■□□□□ 0.29
Sox5P35710 Gm14722-201ENSMUST00000118943 689 ntBASIC16.85■□□□□ 0.29
Sox5P35710 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sox5P35710 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sox5P35710 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.85■□□□□ 0.29
Sox5P35710 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.85■□□□□ 0.29
Sox5P35710 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sox5P35710 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sox5P35710 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.85■□□□□ 0.29
Sox5P35710 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox5P35710 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Sox5P35710 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sox5P35710 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.84■□□□□ 0.29
Sox5P35710 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.84■□□□□ 0.29
Sox5P35710 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.84■□□□□ 0.29
Sox5P35710 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox5P35710 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox5P35710 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Sox5P35710 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox5P35710 Gm25016-201ENSMUST00000158399 131 ntBASIC16.83■□□□□ 0.28
Sox5P35710 Mir3081-201ENSMUST00000175305 84 ntBASIC16.83■□□□□ 0.28
Sox5P35710 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.83■□□□□ 0.28
Sox5P35710 Gm9172-201ENSMUST00000212092 954 ntBASIC16.83■□□□□ 0.28
Sox5P35710 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.83■□□□□ 0.28
Sox5P35710 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.83■□□□□ 0.28
Sox5P35710 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox5P35710 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox5P35710 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox5P35710 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox5P35710 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox5P35710 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sox5P35710 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox5P35710 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox5P35710 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox5P35710 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox5P35710 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox5P35710 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sox5P35710 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.82■□□□□ 0.28
Sox5P35710 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Sox5P35710 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.82■□□□□ 0.28
Sox5P35710 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Olfr129-201ENSMUST00000122318 993 ntBASIC16.82■□□□□ 0.28
Sox5P35710 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sox5P35710 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Gm44454-201ENSMUST00000198541 138 ntBASIC16.82■□□□□ 0.28
Sox5P35710 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox5P35710 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms