Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PdgfbP31240 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PdgfbP31240 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PdgfbP31240 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PdgfbP31240 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PdgfbP31240 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.37■□□□□ 0.05
PdgfbP31240 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PdgfbP31240 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PdgfbP31240 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.36■□□□□ 0.05
PdgfbP31240 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PdgfbP31240 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.36■□□□□ 0.05
PdgfbP31240 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.36■□□□□ 0.05
PdgfbP31240 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PdgfbP31240 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.36■□□□□ 0.05
PdgfbP31240 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PdgfbP31240 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PdgfbP31240 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.36■□□□□ 0.05
PdgfbP31240 Gm27838-201ENSMUST00000184829 128 ntBASIC15.36■□□□□ 0.05
PdgfbP31240 Gm6218-201ENSMUST00000219812 628 ntBASIC15.36■□□□□ 0.05
PdgfbP31240 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PdgfbP31240 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.36■□□□□ 0.05
PdgfbP31240 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.36■□□□□ 0.05
PdgfbP31240 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PdgfbP31240 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PdgfbP31240 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Gm6912-201ENSMUST00000117218 544 ntBASIC15.35■□□□□ 0.05
PdgfbP31240 Gm14722-201ENSMUST00000118943 689 ntBASIC15.35■□□□□ 0.05
PdgfbP31240 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
PdgfbP31240 Gm15321-201ENSMUST00000121290 288 ntBASIC15.35■□□□□ 0.05
PdgfbP31240 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.35■□□□□ 0.05
PdgfbP31240 Gm27533-201ENSMUST00000183800 152 ntBASIC15.35■□□□□ 0.05
PdgfbP31240 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.35■□□□□ 0.05
PdgfbP31240 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.35■□□□□ 0.05
PdgfbP31240 Gm44344-201ENSMUST00000200287 129 ntBASIC15.35■□□□□ 0.05
PdgfbP31240 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.35■□□□□ 0.05
PdgfbP31240 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Gm25857-201ENSMUST00000082788 129 ntBASIC15.35■□□□□ 0.05
PdgfbP31240 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PdgfbP31240 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PdgfbP31240 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.34■□□□□ 0.05
PdgfbP31240 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.34■□□□□ 0.05
PdgfbP31240 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 Gm12859-201ENSMUST00000117834 427 ntBASIC15.34■□□□□ 0.05
PdgfbP31240 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 Gm27680-201ENSMUST00000184192 160 ntBASIC15.34■□□□□ 0.05
PdgfbP31240 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.34■□□□□ 0.05
PdgfbP31240 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PdgfbP31240 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.34■□□□□ 0.05
PdgfbP31240 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PdgfbP31240 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.33■□□□□ 0.05
PdgfbP31240 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PdgfbP31240 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.33■□□□□ 0.04
PdgfbP31240 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.33■□□□□ 0.04
PdgfbP31240 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
PdgfbP31240 Gm27920-201ENSMUST00000183953 96 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms