Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccl6P27784 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccl6P27784 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccl6P27784 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccl6P27784 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccl6P27784 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccl6P27784 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.05□□□□□ -0.48
Ccl6P27784 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccl6P27784 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccl6P27784 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccl6P27784 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.05□□□□□ -0.48
Ccl6P27784 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Ccl6P27784 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccl6P27784 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccl6P27784 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.05□□□□□ -0.48
Ccl6P27784 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ccl6P27784 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccl6P27784 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl6P27784 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccl6P27784 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccl6P27784 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccl6P27784 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Ccl6P27784 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccl6P27784 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccl6P27784 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.04□□□□□ -0.48
Ccl6P27784 Gm18669-201ENSMUST00000216049 778 ntBASIC12.04□□□□□ -0.48
Ccl6P27784 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccl6P27784 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Gm10819-201ENSMUST00000099988 561 ntBASIC12.04□□□□□ -0.48
Ccl6P27784 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccl6P27784 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccl6P27784 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.04□□□□□ -0.48
Ccl6P27784 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl6P27784 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl6P27784 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl6P27784 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccl6P27784 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl6P27784 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl6P27784 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl6P27784 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms