Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.84■□□□□ 0.13
Nfkb1P25799 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nfkb1P25799 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nfkb1P25799 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nfkb1P25799 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nfkb1P25799 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.84■□□□□ 0.13
Nfkb1P25799 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nfkb1P25799 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nfkb1P25799 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nfkb1P25799 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nfkb1P25799 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nfkb1P25799 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nfkb1P25799 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nfkb1P25799 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.83■□□□□ 0.13
Nfkb1P25799 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nfkb1P25799 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nfkb1P25799 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.83■□□□□ 0.12
Nfkb1P25799 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.83■□□□□ 0.12
Nfkb1P25799 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.83■□□□□ 0.12
Nfkb1P25799 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.83■□□□□ 0.12
Nfkb1P25799 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Nfkb1P25799 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nfkb1P25799 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nfkb1P25799 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.83■□□□□ 0.12
Nfkb1P25799 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nfkb1P25799 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.82■□□□□ 0.12
Nfkb1P25799 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.82■□□□□ 0.12
Nfkb1P25799 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Nfkb1P25799 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nfkb1P25799 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.82■□□□□ 0.12
Nfkb1P25799 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.82■□□□□ 0.12
Nfkb1P25799 Gm25925-201ENSMUST00000158314 306 ntBASIC15.82■□□□□ 0.12
Nfkb1P25799 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.82■□□□□ 0.12
Nfkb1P25799 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.82■□□□□ 0.12
Nfkb1P25799 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nfkb1P25799 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nfkb1P25799 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.81■□□□□ 0.12
Nfkb1P25799 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.81■□□□□ 0.12
Nfkb1P25799 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.81■□□□□ 0.12
Nfkb1P25799 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.81■□□□□ 0.12
Nfkb1P25799 Gm17968-201ENSMUST00000194902 784 ntBASIC15.81■□□□□ 0.12
Nfkb1P25799 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.81■□□□□ 0.12
Nfkb1P25799 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Nfkb1P25799 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Nfkb1P25799 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.81■□□□□ 0.12
Nfkb1P25799 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nfkb1P25799 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Nfkb1P25799 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nfkb1P25799 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nfkb1P25799 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nfkb1P25799 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nfkb1P25799 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms