Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.87□□□□□ -0.35
Col8a2P25318 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Col8a2P25318 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Gm25911-201ENSMUST00000157621 56 ntBASIC12.87□□□□□ -0.35
Col8a2P25318 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.87□□□□□ -0.35
Col8a2P25318 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.87□□□□□ -0.35
Col8a2P25318 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.87□□□□□ -0.35
Col8a2P25318 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.87□□□□□ -0.35
Col8a2P25318 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.87□□□□□ -0.35
Col8a2P25318 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col8a2P25318 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col8a2P25318 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col8a2P25318 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col8a2P25318 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Col8a2P25318 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.86□□□□□ -0.35
Col8a2P25318 Gm11764-201ENSMUST00000120221 623 ntBASIC12.86□□□□□ -0.35
Col8a2P25318 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.86□□□□□ -0.35
Col8a2P25318 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.86□□□□□ -0.35
Col8a2P25318 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.86□□□□□ -0.35
Col8a2P25318 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col8a2P25318 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Col8a2P25318 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col8a2P25318 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.85□□□□□ -0.35
Col8a2P25318 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Col8a2P25318 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.85□□□□□ -0.35
Col8a2P25318 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.85□□□□□ -0.35
Col8a2P25318 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.85□□□□□ -0.35
Col8a2P25318 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col8a2P25318 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
Col8a2P25318 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.85□□□□□ -0.35
Col8a2P25318 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Col8a2P25318 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col8a2P25318 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.84□□□□□ -0.35
Col8a2P25318 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col8a2P25318 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.84□□□□□ -0.35
Col8a2P25318 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col8a2P25318 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.84□□□□□ -0.35
Col8a2P25318 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col8a2P25318 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.84□□□□□ -0.35
Col8a2P25318 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Gm10499-201ENSMUST00000174094 934 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms