Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.6■□□□□ 0.25
Irf8P23611 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Irf8P23611 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
Irf8P23611 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.6■□□□□ 0.25
Irf8P23611 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Irf8P23611 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Irf8P23611 BC037039-201ENSMUST00000192003 2205 ntBASIC16.6■□□□□ 0.25
Irf8P23611 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Irf8P23611 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.59■□□□□ 0.25
Irf8P23611 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.59■□□□□ 0.25
Irf8P23611 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.59■□□□□ 0.25
Irf8P23611 Gm27628-201ENSMUST00000184911 107 ntBASIC16.59■□□□□ 0.25
Irf8P23611 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Irf8P23611 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Irf8P23611 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Irf8P23611 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Irf8P23611 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Irf8P23611 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Irf8P23611 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Irf8P23611 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Irf8P23611 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Irf8P23611 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf8P23611 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf8P23611 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.58■□□□□ 0.24
Irf8P23611 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.58■□□□□ 0.24
Irf8P23611 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf8P23611 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Irf8P23611 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf8P23611 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.58■□□□□ 0.24
Irf8P23611 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Irf8P23611 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf8P23611 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf8P23611 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Irf8P23611 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf8P23611 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf8P23611 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf8P23611 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.57■□□□□ 0.24
Irf8P23611 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.57■□□□□ 0.24
Irf8P23611 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.57■□□□□ 0.24
Irf8P23611 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Irf8P23611 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Irf8P23611 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Irf8P23611 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.57■□□□□ 0.24
Irf8P23611 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf8P23611 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.56■□□□□ 0.24
Irf8P23611 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Irf8P23611 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf8P23611 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Irf8P23611 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Irf8P23611 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms