Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pde6bP23440 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.84■□□□□ 0.29
Pde6bP23440 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6bP23440 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6bP23440 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pde6bP23440 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.84■□□□□ 0.29
Pde6bP23440 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6bP23440 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.84■□□□□ 0.29
Pde6bP23440 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6bP23440 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pde6bP23440 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pde6bP23440 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
Pde6bP23440 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Pde6bP23440 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6bP23440 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pde6bP23440 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6bP23440 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6bP23440 Gm9682-201ENSMUST00000197505 556 ntBASIC16.83■□□□□ 0.28
Pde6bP23440 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6bP23440 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.83■□□□□ 0.28
Pde6bP23440 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6bP23440 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6bP23440 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6bP23440 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pde6bP23440 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pde6bP23440 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pde6bP23440 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Pde6bP23440 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Pde6bP23440 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.82■□□□□ 0.28
Pde6bP23440 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.82■□□□□ 0.28
Pde6bP23440 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.82■□□□□ 0.28
Pde6bP23440 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6bP23440 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pde6bP23440 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.81■□□□□ 0.28
Pde6bP23440 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.81■□□□□ 0.28
Pde6bP23440 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Pde6bP23440 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.81■□□□□ 0.28
Pde6bP23440 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.81■□□□□ 0.28
Pde6bP23440 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pde6bP23440 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6bP23440 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.8■□□□□ 0.28
Pde6bP23440 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pde6bP23440 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pde6bP23440 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pde6bP23440 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.8■□□□□ 0.28
Pde6bP23440 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.8■□□□□ 0.28
Pde6bP23440 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.8■□□□□ 0.28
Pde6bP23440 Chchd1-203ENSMUST00000224633 557 ntBASIC16.8■□□□□ 0.28
Pde6bP23440 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.8■□□□□ 0.28
Pde6bP23440 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pde6bP23440 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms