Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Clk1P22518 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.38□□□□□ -0.11
Clk1P22518 Gm12895-201ENSMUST00000122214 226 ntBASIC14.38□□□□□ -0.11
Clk1P22518 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.38□□□□□ -0.11
Clk1P22518 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.38□□□□□ -0.11
Clk1P22518 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clk1P22518 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Clk1P22518 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clk1P22518 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clk1P22518 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Ank2-226ENSMUST00000189368 339 ntBASIC14.37□□□□□ -0.11
Clk1P22518 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.37□□□□□ -0.11
Clk1P22518 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Clk1P22518 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.37□□□□□ -0.11
Clk1P22518 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk1P22518 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.36□□□□□ -0.11
Clk1P22518 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clk1P22518 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Clk1P22518 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.36□□□□□ -0.11
Clk1P22518 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.36□□□□□ -0.11
Clk1P22518 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.36□□□□□ -0.11
Clk1P22518 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Clk1P22518 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Clk1P22518 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clk1P22518 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clk1P22518 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Clk1P22518 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk1P22518 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Clk1P22518 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clk1P22518 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clk1P22518 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.35□□□□□ -0.11
Clk1P22518 Gm12497-201ENSMUST00000138778 237 ntBASIC14.35□□□□□ -0.11
Clk1P22518 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.35□□□□□ -0.11
Clk1P22518 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk1P22518 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms