Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tpm3P21107 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.31■□□□□ 0.36
Tpm3P21107 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tpm3P21107 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.31■□□□□ 0.36
Tpm3P21107 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Tpm3P21107 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Tpm3P21107 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tpm3P21107 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.3■□□□□ 0.36
Tpm3P21107 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.3■□□□□ 0.36
Tpm3P21107 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.3■□□□□ 0.36
Tpm3P21107 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tpm3P21107 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.3■□□□□ 0.36
Tpm3P21107 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.3■□□□□ 0.36
Tpm3P21107 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.3■□□□□ 0.36
Tpm3P21107 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.3■□□□□ 0.36
Tpm3P21107 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tpm3P21107 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.3■□□□□ 0.36
Tpm3P21107 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm3P21107 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tpm3P21107 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tpm3P21107 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.29■□□□□ 0.36
Tpm3P21107 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.29■□□□□ 0.36
Tpm3P21107 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 Gm20760-201ENSMUST00000179197 648 ntBASIC17.29■□□□□ 0.36
Tpm3P21107 Gm3375-201ENSMUST00000203929 796 ntBASIC17.29■□□□□ 0.36
Tpm3P21107 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.29■□□□□ 0.36
Tpm3P21107 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Tpm3P21107 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Tpm3P21107 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm3P21107 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tpm3P21107 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Gm6257-201ENSMUST00000163864 910 ntBASIC17.28■□□□□ 0.36
Tpm3P21107 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tpm3P21107 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm3P21107 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tpm3P21107 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tpm3P21107 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.28■□□□□ 0.36
Tpm3P21107 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpm3P21107 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpm3P21107 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpm3P21107 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.27■□□□□ 0.36
Tpm3P21107 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpm3P21107 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpm3P21107 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.27■□□□□ 0.36
Tpm3P21107 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.27■□□□□ 0.36
Tpm3P21107 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms