Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cxcl1P12850 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cxcl1P12850 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Cxcl1P12850 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cxcl1P12850 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cxcl1P12850 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl1P12850 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl1P12850 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Cxcl1P12850 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl1P12850 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl1P12850 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.77□□□□□ -0.36
Cxcl1P12850 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl1P12850 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Cxcl1P12850 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cxcl1P12850 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.77□□□□□ -0.37
Cxcl1P12850 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.77□□□□□ -0.37
Cxcl1P12850 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.77□□□□□ -0.37
Cxcl1P12850 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.77□□□□□ -0.37
Cxcl1P12850 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cxcl1P12850 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.77□□□□□ -0.37
Cxcl1P12850 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.77□□□□□ -0.37
Cxcl1P12850 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.77□□□□□ -0.37
Cxcl1P12850 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Cxcl1P12850 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl1P12850 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Gm14722-201ENSMUST00000118943 689 ntBASIC12.76□□□□□ -0.37
Cxcl1P12850 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cxcl1P12850 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cxcl1P12850 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Cxcl1P12850 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cxcl1P12850 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl1P12850 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.75□□□□□ -0.37
Cxcl1P12850 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Gm9013-201ENSMUST00000132939 882 ntBASIC12.75□□□□□ -0.37
Cxcl1P12850 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms