Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxd4P10628 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxd4P10628 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxd4P10628 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxd4P10628 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Hoxd4P10628 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.19
Hoxd4P10628 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxd4P10628 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxd4P10628 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxd4P10628 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxd4P10628 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.83□□□□□ -0.2
Hoxd4P10628 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxd4P10628 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Gm43183-201ENSMUST00000200632 547 ntBASIC13.83□□□□□ -0.2
Hoxd4P10628 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxd4P10628 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.83□□□□□ -0.2
Hoxd4P10628 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.83□□□□□ -0.2
Hoxd4P10628 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxd4P10628 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxd4P10628 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Hoxd4P10628 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hoxd4P10628 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxd4P10628 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxd4P10628 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxd4P10628 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hoxd4P10628 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hoxd4P10628 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.82□□□□□ -0.2
Hoxd4P10628 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxd4P10628 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.82□□□□□ -0.2
Hoxd4P10628 Il3ra-202ENSMUST00000223589 738 ntBASIC13.82□□□□□ -0.2
Hoxd4P10628 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hoxd4P10628 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.82□□□□□ -0.2
Hoxd4P10628 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxd4P10628 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxd4P10628 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxd4P10628 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxd4P10628 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxd4P10628 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.81□□□□□ -0.2
Hoxd4P10628 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxd4P10628 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxd4P10628 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxd4P10628 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hoxd4P10628 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms