Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Rps4l-201ENSMUST00000071745 943 ntBASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.8■□□□□ 0.28
Chmp6P0C0A3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Gm18622-201ENSMUST00000219361 595 ntBASIC16.8■□□□□ 0.28
Chmp6P0C0A3 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp6P0C0A3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Gm4535-201ENSMUST00000182274 558 ntBASIC16.79■□□□□ 0.28
Chmp6P0C0A3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.79■□□□□ 0.28
Chmp6P0C0A3 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Mzt1-203ENSMUST00000227948 952 ntBASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Gm10355-201ENSMUST00000097146 517 ntBASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp6P0C0A3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Gm13418-201ENSMUST00000119097 944 ntBASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.78■□□□□ 0.28
Chmp6P0C0A3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp6P0C0A3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.77■□□□□ 0.28
Chmp6P0C0A3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp6P0C0A3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp6P0C0A3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp6P0C0A3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp6P0C0A3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp6P0C0A3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.77■□□□□ 0.28
Chmp6P0C0A3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.77■□□□□ 0.28
Chmp6P0C0A3 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.77■□□□□ 0.28
Chmp6P0C0A3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms