Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.27□□□□□ -0.29
Hoxa6P09092 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Hoxa6P09092 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxa6P09092 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Hoxa6P09092 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxa6P09092 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa6P09092 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa6P09092 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa6P09092 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Hoxa6P09092 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa6P09092 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.26□□□□□ -0.29
Hoxa6P09092 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.26□□□□□ -0.29
Hoxa6P09092 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.26□□□□□ -0.29
Hoxa6P09092 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa6P09092 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa6P09092 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Hoxa6P09092 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa6P09092 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa6P09092 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa6P09092 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxa6P09092 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hoxa6P09092 Gm24513-201ENSMUST00000174964 138 ntBASIC13.25□□□□□ -0.29
Hoxa6P09092 Gm27397-201ENSMUST00000184997 107 ntBASIC13.25□□□□□ -0.29
Hoxa6P09092 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.25□□□□□ -0.29
Hoxa6P09092 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxa6P09092 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxa6P09092 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxa6P09092 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.25□□□□□ -0.29
Hoxa6P09092 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.25□□□□□ -0.29
Hoxa6P09092 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Rubie-203ENSMUST00000227803 2430 ntBASIC13.25□□□□□ -0.29
Hoxa6P09092 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Hoxa6P09092 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxa6P09092 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa6P09092 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.24□□□□□ -0.29
Hoxa6P09092 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Hoxa6P09092 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hoxa6P09092 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa6P09092 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms