Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P04214 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
P04214 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
P04214 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
P04214 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.06■□□□□ 0.16
P04214 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.06■□□□□ 0.16
P04214 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
P04214 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.05■□□□□ 0.16
P04214 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.05■□□□□ 0.16
P04214 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.05■□□□□ 0.16
P04214 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.05■□□□□ 0.16
P04214 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.05■□□□□ 0.16
P04214 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
P04214 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
P04214 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04214 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04214 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04214 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
P04214 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.04■□□□□ 0.16
P04214 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04214 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04214 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
P04214 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.04■□□□□ 0.16
P04214 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04214 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
P04214 Gm27533-201ENSMUST00000183800 152 ntBASIC16.04■□□□□ 0.16
P04214 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.04■□□□□ 0.16
P04214 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.04■□□□□ 0.16
P04214 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.04■□□□□ 0.16
P04214 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
P04214 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.04■□□□□ 0.16
P04214 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04214 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04214 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
P04214 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
P04214 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
P04214 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.03■□□□□ 0.16
P04214 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.03■□□□□ 0.16
P04214 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.03■□□□□ 0.16
P04214 Gm27838-201ENSMUST00000184829 128 ntBASIC16.03■□□□□ 0.16
P04214 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.03■□□□□ 0.16
P04214 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.03■□□□□ 0.16
P04214 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
P04214 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.03■□□□□ 0.16
P04214 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
P04214 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04214 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.03■□□□□ 0.16
P04214 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.03■□□□□ 0.16
P04214 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.02■□□□□ 0.16
P04214 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
P04214 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.02■□□□□ 0.16
P04214 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
P04214 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
P04214 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
P04214 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
P04214 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.02■□□□□ 0.16
P04214 Gm44344-201ENSMUST00000200287 129 ntBASIC16.02■□□□□ 0.16
P04214 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04214 Gm9794-201ENSMUST00000202370 423 ntBASIC16.02■□□□□ 0.16
P04214 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
P04214 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.02■□□□□ 0.16
P04214 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.02■□□□□ 0.16
P04214 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms