Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Gm7638-201ENSMUST00000121348 967 ntBASIC11.28□□□□□ -0.6
TcraP01849 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.28□□□□□ -0.6
TcraP01849 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
TcraP01849 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.28□□□□□ -0.6
TcraP01849 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.28□□□□□ -0.6
TcraP01849 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.28□□□□□ -0.6
TcraP01849 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
TcraP01849 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TcraP01849 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TcraP01849 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TcraP01849 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TcraP01849 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TcraP01849 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TcraP01849 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
TcraP01849 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
TcraP01849 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.27□□□□□ -0.61
TcraP01849 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TcraP01849 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
TcraP01849 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TcraP01849 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
TcraP01849 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TcraP01849 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TcraP01849 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.27□□□□□ -0.61
TcraP01849 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TcraP01849 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms