Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hdac3O88895 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Hdac3O88895 Gm44454-201ENSMUST00000198541 138 ntBASIC13.83□□□□□ -0.2
Hdac3O88895 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.83□□□□□ -0.2
Hdac3O88895 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Hdac3O88895 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hdac3O88895 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.83□□□□□ -0.2
Hdac3O88895 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hdac3O88895 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hdac3O88895 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hdac3O88895 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Gm7284-201ENSMUST00000131667 944 ntBASIC13.82□□□□□ -0.2
Hdac3O88895 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hdac3O88895 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.82□□□□□ -0.2
Hdac3O88895 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hdac3O88895 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.82□□□□□ -0.2
Hdac3O88895 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hdac3O88895 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.82□□□□□ -0.2
Hdac3O88895 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac3O88895 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hdac3O88895 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.81□□□□□ -0.2
Hdac3O88895 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hdac3O88895 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.81□□□□□ -0.2
Hdac3O88895 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hdac3O88895 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hdac3O88895 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.81□□□□□ -0.2
Hdac3O88895 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.81□□□□□ -0.2
Hdac3O88895 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Hdac3O88895 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hdac3O88895 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.81□□□□□ -0.2
Hdac3O88895 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hdac3O88895 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hdac3O88895 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.81□□□□□ -0.2
Hdac3O88895 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac3O88895 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms