Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.8□□□□□ -0.04
Hcn3O88705 Gm11336-201ENSMUST00000118168 334 ntBASIC14.8□□□□□ -0.04
Hcn3O88705 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.8□□□□□ -0.04
Hcn3O88705 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Hcn3O88705 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hcn3O88705 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.8□□□□□ -0.04
Hcn3O88705 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Hcn3O88705 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hcn3O88705 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Hcn3O88705 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.8□□□□□ -0.04
Hcn3O88705 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.8□□□□□ -0.04
Hcn3O88705 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hcn3O88705 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.8□□□□□ -0.04
Hcn3O88705 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn3O88705 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hcn3O88705 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hcn3O88705 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Hcn3O88705 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.79□□□□□ -0.04
Hcn3O88705 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.79□□□□□ -0.04
Hcn3O88705 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.79□□□□□ -0.04
Hcn3O88705 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hcn3O88705 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hcn3O88705 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn3O88705 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hcn3O88705 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hcn3O88705 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hcn3O88705 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn3O88705 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Hcn3O88705 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.77□□□□□ -0.04
Hcn3O88705 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn3O88705 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn3O88705 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn3O88705 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn3O88705 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn3O88705 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.77□□□□□ -0.04
Hcn3O88705 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn3O88705 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn3O88705 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Hcn3O88705 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn3O88705 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn3O88705 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.77□□□□□ -0.05
Hcn3O88705 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Hcn3O88705 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.77□□□□□ -0.05
Hcn3O88705 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn3O88705 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
Hcn3O88705 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hcn3O88705 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hcn3O88705 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hcn3O88705 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hcn3O88705 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hcn3O88705 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hcn3O88705 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hcn3O88705 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms