Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hcn1O88704 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Hcn1O88704 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hcn1O88704 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hcn1O88704 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.8□□□□□ -0.04
Hcn1O88704 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hcn1O88704 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.8□□□□□ -0.04
Hcn1O88704 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hcn1O88704 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Hcn1O88704 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hcn1O88704 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hcn1O88704 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Hcn1O88704 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Gm43347-201ENSMUST00000200226 580 ntBASIC14.79□□□□□ -0.04
Hcn1O88704 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.79□□□□□ -0.04
Hcn1O88704 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hcn1O88704 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hcn1O88704 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.79□□□□□ -0.04
Hcn1O88704 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hcn1O88704 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hcn1O88704 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hcn1O88704 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hcn1O88704 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.78□□□□□ -0.04
Hcn1O88704 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hcn1O88704 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hcn1O88704 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.78□□□□□ -0.04
Hcn1O88704 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.78□□□□□ -0.04
Hcn1O88704 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Hcn1O88704 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Hcn1O88704 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hcn1O88704 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hcn1O88704 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.77□□□□□ -0.04
Hcn1O88704 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.77□□□□□ -0.04
Hcn1O88704 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hcn1O88704 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Hcn1O88704 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn1O88704 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Hcn1O88704 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn1O88704 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn1O88704 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hcn1O88704 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms