Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Lmx1bO88609 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.98□□□□□ -0.17
Lmx1bO88609 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Gm4995-201ENSMUST00000117247 432 ntBASIC13.98□□□□□ -0.17
Lmx1bO88609 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.98□□□□□ -0.17
Lmx1bO88609 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.98□□□□□ -0.17
Lmx1bO88609 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.98□□□□□ -0.17
Lmx1bO88609 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.98□□□□□ -0.17
Lmx1bO88609 Gm45167-201ENSMUST00000208007 322 ntBASIC13.98□□□□□ -0.17
Lmx1bO88609 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.98□□□□□ -0.17
Lmx1bO88609 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lmx1bO88609 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lmx1bO88609 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lmx1bO88609 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.97□□□□□ -0.17
Lmx1bO88609 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lmx1bO88609 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.97□□□□□ -0.17
Lmx1bO88609 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.97□□□□□ -0.17
Lmx1bO88609 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.97□□□□□ -0.17
Lmx1bO88609 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.97□□□□□ -0.17
Lmx1bO88609 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lmx1bO88609 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lmx1bO88609 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.97□□□□□ -0.17
Lmx1bO88609 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Lmx1bO88609 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lmx1bO88609 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Lmx1bO88609 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lmx1bO88609 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.96□□□□□ -0.17
Lmx1bO88609 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Lmx1bO88609 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.96□□□□□ -0.17
Lmx1bO88609 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.96□□□□□ -0.17
Lmx1bO88609 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.96□□□□□ -0.17
Lmx1bO88609 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lmx1bO88609 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lmx1bO88609 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lmx1bO88609 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lmx1bO88609 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lmx1bO88609 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lmx1bO88609 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lmx1bO88609 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lmx1bO88609 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lmx1bO88609 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lmx1bO88609 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lmx1bO88609 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms