Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Cops4O88544 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.27□□□□□ -0.12
Cops4O88544 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.27□□□□□ -0.12
Cops4O88544 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.27□□□□□ -0.13
Cops4O88544 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cops4O88544 Gm27389-201ENSMUST00000183622 195 ntBASIC14.27□□□□□ -0.13
Cops4O88544 Mir6982-201ENSMUST00000184354 68 ntBASIC14.27□□□□□ -0.13
Cops4O88544 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.27□□□□□ -0.13
Cops4O88544 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.27□□□□□ -0.13
Cops4O88544 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cops4O88544 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.27□□□□□ -0.13
Cops4O88544 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cops4O88544 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cops4O88544 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cops4O88544 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cops4O88544 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cops4O88544 Efs-202ENSMUST00000227037 2540 ntBASIC14.26□□□□□ -0.13
Cops4O88544 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.26□□□□□ -0.13
Cops4O88544 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.26□□□□□ -0.13
Cops4O88544 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cops4O88544 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cops4O88544 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.26□□□□□ -0.13
Cops4O88544 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.26□□□□□ -0.13
Cops4O88544 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cops4O88544 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cops4O88544 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.26□□□□□ -0.13
Cops4O88544 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.26□□□□□ -0.13
Cops4O88544 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.26□□□□□ -0.13
Cops4O88544 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cops4O88544 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.25□□□□□ -0.13
Cops4O88544 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cops4O88544 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.25□□□□□ -0.13
Cops4O88544 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.25□□□□□ -0.13
Cops4O88544 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cops4O88544 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.25□□□□□ -0.13
Cops4O88544 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.25□□□□□ -0.13
Cops4O88544 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cops4O88544 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.25□□□□□ -0.13
Cops4O88544 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cops4O88544 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops4O88544 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cops4O88544 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops4O88544 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cops4O88544 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms