Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.16■□□□□ 0.5
Slc4a4O88343 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Slc4a4O88343 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.16■□□□□ 0.5
Slc4a4O88343 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Slc4a4O88343 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.16■□□□□ 0.5
Slc4a4O88343 Gm18246-201ENSMUST00000221023 728 ntBASIC18.16■□□□□ 0.5
Slc4a4O88343 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Slc4a4O88343 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc4a4O88343 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc4a4O88343 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Slc4a4O88343 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Slc4a4O88343 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.15■□□□□ 0.5
Slc4a4O88343 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc4a4O88343 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.15■□□□□ 0.5
Slc4a4O88343 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc4a4O88343 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.15■□□□□ 0.5
Slc4a4O88343 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc4a4O88343 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Slc4a4O88343 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc4a4O88343 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Slc4a4O88343 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Slc4a4O88343 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc4a4O88343 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Slc4a4O88343 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.14■□□□□ 0.49
Slc4a4O88343 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.14■□□□□ 0.49
Slc4a4O88343 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Slc4a4O88343 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.14■□□□□ 0.49
Slc4a4O88343 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.14■□□□□ 0.49
Slc4a4O88343 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.14■□□□□ 0.49
Slc4a4O88343 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.14■□□□□ 0.49
Slc4a4O88343 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.14■□□□□ 0.49
Slc4a4O88343 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Slc4a4O88343 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.14■□□□□ 0.49
Slc4a4O88343 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Slc4a4O88343 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc4a4O88343 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc4a4O88343 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc4a4O88343 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc4a4O88343 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Slc4a4O88343 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc4a4O88343 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Slc4a4O88343 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.13■□□□□ 0.49
Slc4a4O88343 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Slc4a4O88343 Gm4995-201ENSMUST00000117247 432 ntBASIC18.13■□□□□ 0.49
Slc4a4O88343 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.13■□□□□ 0.49
Slc4a4O88343 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.13■□□□□ 0.49
Slc4a4O88343 Mir3113-201ENSMUST00000175478 76 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms