Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.05■□□□□ 0.16
Ttc3O88196 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ttc3O88196 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Ttc3O88196 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ttc3O88196 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ttc3O88196 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ttc3O88196 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.04■□□□□ 0.16
Ttc3O88196 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.04■□□□□ 0.16
Ttc3O88196 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.04■□□□□ 0.16
Ttc3O88196 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ttc3O88196 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Ttc3O88196 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Ttc3O88196 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.04■□□□□ 0.16
Ttc3O88196 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Gm2810-201ENSMUST00000118681 990 ntBASIC16.04■□□□□ 0.16
Ttc3O88196 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 AA543401-201ENSMUST00000164248 1269 ntBASIC16.04■□□□□ 0.16
Ttc3O88196 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.04■□□□□ 0.16
Ttc3O88196 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Gm29541-201ENSMUST00000191351 678 ntBASIC16.04■□□□□ 0.16
Ttc3O88196 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.04■□□□□ 0.16
Ttc3O88196 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ttc3O88196 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Gm38294-201ENSMUST00000192831 381 ntBASIC16.03■□□□□ 0.16
Ttc3O88196 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.03■□□□□ 0.16
Ttc3O88196 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.03■□□□□ 0.16
Ttc3O88196 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ttc3O88196 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.03■□□□□ 0.16
Ttc3O88196 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ttc3O88196 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.03■□□□□ 0.16
Ttc3O88196 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ttc3O88196 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.02■□□□□ 0.16
Ttc3O88196 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.02■□□□□ 0.16
Ttc3O88196 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Gm27920-201ENSMUST00000183953 96 ntBASIC16.02■□□□□ 0.16
Ttc3O88196 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.02■□□□□ 0.16
Ttc3O88196 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.02■□□□□ 0.16
Ttc3O88196 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.02■□□□□ 0.16
Ttc3O88196 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ttc3O88196 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ttc3O88196 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.02■□□□□ 0.15
Ttc3O88196 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Ttc3O88196 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ttc3O88196 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ttc3O88196 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ttc3O88196 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ttc3O88196 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ttc3O88196 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.01■□□□□ 0.15
Ttc3O88196 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ttc3O88196 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ttc3O88196 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ttc3O88196 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ttc3O88196 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ttc3O88196 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ttc3O88196 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms