Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.99□□□□□ -0.17
Pdlim3O70209 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.99□□□□□ -0.17
Pdlim3O70209 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pdlim3O70209 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.99□□□□□ -0.17
Pdlim3O70209 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Pdlim3O70209 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.99□□□□□ -0.17
Pdlim3O70209 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pdlim3O70209 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim3O70209 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.99□□□□□ -0.17
Pdlim3O70209 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.98□□□□□ -0.17
Pdlim3O70209 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.98□□□□□ -0.17
Pdlim3O70209 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Efs-202ENSMUST00000227037 2540 ntBASIC13.98□□□□□ -0.17
Pdlim3O70209 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.98□□□□□ -0.17
Pdlim3O70209 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.98□□□□□ -0.17
Pdlim3O70209 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Pdlim3O70209 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.98□□□□□ -0.17
Pdlim3O70209 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.98□□□□□ -0.17
Pdlim3O70209 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.98□□□□□ -0.17
Pdlim3O70209 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.98□□□□□ -0.17
Pdlim3O70209 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim3O70209 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pdlim3O70209 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Pdlim3O70209 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pdlim3O70209 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Pdlim3O70209 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pdlim3O70209 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Pdlim3O70209 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Pdlim3O70209 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim3O70209 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms