Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Trdmt1O55055 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trdmt1O55055 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.92■□□□□ 0.3
Trdmt1O55055 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.92■□□□□ 0.3
Trdmt1O55055 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.92■□□□□ 0.3
Trdmt1O55055 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Trdmt1O55055 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trdmt1O55055 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trdmt1O55055 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.92■□□□□ 0.3
Trdmt1O55055 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trdmt1O55055 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trdmt1O55055 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.91■□□□□ 0.3
Trdmt1O55055 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trdmt1O55055 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trdmt1O55055 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trdmt1O55055 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.91■□□□□ 0.3
Trdmt1O55055 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.91■□□□□ 0.3
Trdmt1O55055 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.91■□□□□ 0.3
Trdmt1O55055 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdmt1O55055 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.9■□□□□ 0.3
Trdmt1O55055 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trdmt1O55055 Gm2810-201ENSMUST00000118681 990 ntBASIC16.9■□□□□ 0.3
Trdmt1O55055 Gm15693-201ENSMUST00000120470 637 ntBASIC16.9■□□□□ 0.3
Trdmt1O55055 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.9■□□□□ 0.3
Trdmt1O55055 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.9■□□□□ 0.3
Trdmt1O55055 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.9■□□□□ 0.3
Trdmt1O55055 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.9■□□□□ 0.3
Trdmt1O55055 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.9■□□□□ 0.3
Trdmt1O55055 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.9■□□□□ 0.3
Trdmt1O55055 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
Trdmt1O55055 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trdmt1O55055 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trdmt1O55055 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.9■□□□□ 0.3
Trdmt1O55055 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdmt1O55055 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Trdmt1O55055 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Trdmt1O55055 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Trdmt1O55055 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trdmt1O55055 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trdmt1O55055 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trdmt1O55055 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Trdmt1O55055 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Gm11543-201ENSMUST00000120758 370 ntBASIC16.89■□□□□ 0.29
Trdmt1O55055 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.89■□□□□ 0.29
Trdmt1O55055 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trdmt1O55055 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trdmt1O55055 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms