Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CrxO54751 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CrxO54751 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.29□□□□□ -0.6
CrxO54751 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.29□□□□□ -0.6
CrxO54751 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CrxO54751 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.29□□□□□ -0.6
CrxO54751 Gm2559-201ENSMUST00000201323 363 ntBASIC11.29□□□□□ -0.6
CrxO54751 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.29□□□□□ -0.6
CrxO54751 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CrxO54751 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Gm4968-201ENSMUST00000071458 858 ntBASIC11.29□□□□□ -0.6
CrxO54751 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
CrxO54751 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.29□□□□□ -0.6
CrxO54751 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CrxO54751 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CrxO54751 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CrxO54751 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.29□□□□□ -0.6
CrxO54751 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.28□□□□□ -0.6
CrxO54751 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.28□□□□□ -0.6
CrxO54751 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.28□□□□□ -0.6
CrxO54751 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.28□□□□□ -0.6
CrxO54751 Gm15375-201ENSMUST00000119510 849 ntBASIC11.28□□□□□ -0.6
CrxO54751 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CrxO54751 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.28□□□□□ -0.6
CrxO54751 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.28□□□□□ -0.6
CrxO54751 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CrxO54751 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CrxO54751 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CrxO54751 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.28□□□□□ -0.6
CrxO54751 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
CrxO54751 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
CrxO54751 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CrxO54751 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.28□□□□□ -0.6
CrxO54751 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CrxO54751 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CrxO54751 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CrxO54751 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CrxO54751 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CrxO54751 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.27□□□□□ -0.6
CrxO54751 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CrxO54751 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CrxO54751 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CrxO54751 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CrxO54751 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CrxO54751 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms