Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccr6O54689 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccr6O54689 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ccr6O54689 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ccr6O54689 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.96□□□□□ -0.33
Ccr6O54689 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.96□□□□□ -0.33
Ccr6O54689 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccr6O54689 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccr6O54689 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccr6O54689 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccr6O54689 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.96□□□□□ -0.34
Ccr6O54689 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccr6O54689 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccr6O54689 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccr6O54689 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccr6O54689 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccr6O54689 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccr6O54689 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccr6O54689 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccr6O54689 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccr6O54689 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccr6O54689 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Ccr6O54689 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.95□□□□□ -0.34
Ccr6O54689 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccr6O54689 Gm37856-201ENSMUST00000191634 999 ntBASIC12.95□□□□□ -0.34
Ccr6O54689 Trmt13-210ENSMUST00000198454 880 ntBASIC12.95□□□□□ -0.34
Ccr6O54689 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.95□□□□□ -0.34
Ccr6O54689 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.95□□□□□ -0.34
Ccr6O54689 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.95□□□□□ -0.34
Ccr6O54689 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Ccr6O54689 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ccr6O54689 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccr6O54689 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccr6O54689 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ccr6O54689 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccr6O54689 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.94□□□□□ -0.34
Ccr6O54689 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ccr6O54689 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccr6O54689 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.94□□□□□ -0.34
Ccr6O54689 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Gm3375-201ENSMUST00000203929 796 ntBASIC12.94□□□□□ -0.34
Ccr6O54689 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.94□□□□□ -0.34
Ccr6O54689 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms