Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm2O35900 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm2O35900 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm2O35900 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm2O35900 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm2O35900 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm2O35900 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Lsm2O35900 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Lsm2O35900 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm2O35900 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm2O35900 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lsm2O35900 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.73□□□□□ -0.21
Lsm2O35900 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.73□□□□□ -0.21
Lsm2O35900 Gm23547-201ENSMUST00000158210 271 ntBASIC13.73□□□□□ -0.21
Lsm2O35900 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Lsm2O35900 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.73□□□□□ -0.21
Lsm2O35900 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lsm2O35900 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.73□□□□□ -0.21
Lsm2O35900 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.73□□□□□ -0.21
Lsm2O35900 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm2O35900 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lsm2O35900 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lsm2O35900 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Lsm2O35900 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.72□□□□□ -0.21
Lsm2O35900 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lsm2O35900 Gm30025-201ENSMUST00000218555 728 ntBASIC13.72□□□□□ -0.21
Lsm2O35900 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.72□□□□□ -0.21
Lsm2O35900 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lsm2O35900 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.72□□□□□ -0.21
Lsm2O35900 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm2O35900 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lsm2O35900 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lsm2O35900 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms