Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.35■□□□□ 0.37
Stx1aO35526 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.35■□□□□ 0.37
Stx1aO35526 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Stx1aO35526 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.35■□□□□ 0.37
Stx1aO35526 Gm6623-201ENSMUST00000173570 544 ntBASIC17.35■□□□□ 0.37
Stx1aO35526 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.35■□□□□ 0.37
Stx1aO35526 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.35■□□□□ 0.37
Stx1aO35526 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.34■□□□□ 0.37
Stx1aO35526 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Stx1aO35526 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Stx1aO35526 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.34■□□□□ 0.37
Stx1aO35526 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Stx1aO35526 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Stx1aO35526 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Stx1aO35526 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Stx1aO35526 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Stx1aO35526 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.33■□□□□ 0.37
Stx1aO35526 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stx1aO35526 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.33■□□□□ 0.36
Stx1aO35526 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stx1aO35526 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Stx1aO35526 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Gm15565-201ENSMUST00000118890 427 ntBASIC17.32■□□□□ 0.36
Stx1aO35526 Gm9013-201ENSMUST00000132939 882 ntBASIC17.32■□□□□ 0.36
Stx1aO35526 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.32■□□□□ 0.36
Stx1aO35526 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.32■□□□□ 0.36
Stx1aO35526 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Stx1aO35526 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.32■□□□□ 0.36
Stx1aO35526 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Stx1aO35526 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Stx1aO35526 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stx1aO35526 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Stx1aO35526 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Stx1aO35526 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms