Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Clcn6O35454 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.72■□□□□ 0.27
Clcn6O35454 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Clcn6O35454 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.71■□□□□ 0.27
Clcn6O35454 Gm13924-201ENSMUST00000119899 486 ntBASIC16.71■□□□□ 0.27
Clcn6O35454 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC16.71■□□□□ 0.27
Clcn6O35454 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.71■□□□□ 0.27
Clcn6O35454 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Clcn6O35454 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Clcn6O35454 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 1700023G09Rik-201ENSMUST00000194513 1460 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.71■□□□□ 0.27
Clcn6O35454 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn6O35454 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Clcn6O35454 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Clcn6O35454 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC16.7■□□□□ 0.26
Clcn6O35454 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Clcn6O35454 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Clcn6O35454 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.7■□□□□ 0.26
Clcn6O35454 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.7■□□□□ 0.26
Clcn6O35454 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Gm21943-201ENSMUST00000178181 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Clcn6O35454 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Gm37466-201ENSMUST00000195692 652 ntBASIC16.7■□□□□ 0.26
Clcn6O35454 Gm34272-201ENSMUST00000208886 253 ntBASIC16.7■□□□□ 0.26
Clcn6O35454 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Clcn6O35454 Gm45925-201ENSMUST00000218882 744 ntBASIC16.7■□□□□ 0.26
Clcn6O35454 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC16.7■□□□□ 0.26
Clcn6O35454 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Clcn6O35454 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Clcn6O35454 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Clcn6O35454 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.7■□□□□ 0.26
Clcn6O35454 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Clcn6O35454 Gm44746-201ENSMUST00000205565 1349 ntBASIC16.7■□□□□ 0.26
Clcn6O35454 Gm44562-201ENSMUST00000207194 1347 ntBASIC16.7■□□□□ 0.26
Clcn6O35454 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn6O35454 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.69■□□□□ 0.26
Clcn6O35454 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clcn6O35454 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Clcn6O35454 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Clcn6O35454 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 Gm45263-201ENSMUST00000210377 1375 ntBASIC16.69■□□□□ 0.26
Clcn6O35454 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.69■□□□□ 0.26
Clcn6O35454 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Clcn6O35454 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.69■□□□□ 0.26
Clcn6O35454 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.69■□□□□ 0.26
Clcn6O35454 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.69■□□□□ 0.26
Clcn6O35454 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn6O35454 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms