Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.35□□□□□ -0.27
Gfra3O35118 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.34□□□□□ -0.27
Gfra3O35118 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.34□□□□□ -0.27
Gfra3O35118 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.34□□□□□ -0.27
Gfra3O35118 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Gfra3O35118 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Gm12260-201ENSMUST00000122447 411 ntBASIC13.34□□□□□ -0.27
Gfra3O35118 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.34□□□□□ -0.27
Gfra3O35118 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Gfra3O35118 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.34□□□□□ -0.27
Gfra3O35118 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.34□□□□□ -0.27
Gfra3O35118 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.34□□□□□ -0.27
Gfra3O35118 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.34□□□□□ -0.27
Gfra3O35118 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.34□□□□□ -0.27
Gfra3O35118 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.34□□□□□ -0.27
Gfra3O35118 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.34□□□□□ -0.27
Gfra3O35118 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gfra3O35118 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gfra3O35118 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gfra3O35118 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gfra3O35118 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.33□□□□□ -0.28
Gfra3O35118 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.33□□□□□ -0.28
Gfra3O35118 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.33□□□□□ -0.28
Gfra3O35118 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Gfra3O35118 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Gfra3O35118 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Gfra3O35118 Gm11779-201ENSMUST00000118541 368 ntBASIC13.33□□□□□ -0.28
Gfra3O35118 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.33□□□□□ -0.28
Gfra3O35118 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.33□□□□□ -0.28
Gfra3O35118 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.33□□□□□ -0.28
Gfra3O35118 Gm8000-201ENSMUST00000188378 592 ntBASIC13.33□□□□□ -0.28
Gfra3O35118 Gm42660-201ENSMUST00000197733 947 ntBASIC13.33□□□□□ -0.28
Gfra3O35118 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.33□□□□□ -0.28
Gfra3O35118 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.33□□□□□ -0.28
Gfra3O35118 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Gfra3O35118 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Gfra3O35118 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.33□□□□□ -0.28
Gfra3O35118 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gfra3O35118 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gfra3O35118 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gfra3O35118 Gm4899-201ENSMUST00000178708 719 ntBASIC13.32□□□□□ -0.28
Gfra3O35118 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.32□□□□□ -0.28
Gfra3O35118 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Gm9682-201ENSMUST00000197505 556 ntBASIC13.32□□□□□ -0.28
Gfra3O35118 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.32□□□□□ -0.28
Gfra3O35118 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.32□□□□□ -0.28
Gfra3O35118 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.32□□□□□ -0.28
Gfra3O35118 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Gfra3O35118 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms