Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Gm12620-201ENSMUST00000119791 1986 ntBASIC18.37■□□□□ 0.53
Hdac1O09106 Gm12612-201ENSMUST00000140182 1986 ntBASIC18.37■□□□□ 0.53
Hdac1O09106 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Hdac1O09106 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.36■□□□□ 0.53
Hdac1O09106 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Hdac1O09106 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Gm44454-201ENSMUST00000198541 138 ntBASIC18.36■□□□□ 0.53
Hdac1O09106 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Hdac1O09106 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac1O09106 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Hdac1O09106 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Rprl3-201ENSMUST00000157400 290 ntBASIC18.35■□□□□ 0.53
Hdac1O09106 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.35■□□□□ 0.53
Hdac1O09106 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.35■□□□□ 0.53
Hdac1O09106 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.35■□□□□ 0.53
Hdac1O09106 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Hdac1O09106 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac1O09106 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hdac1O09106 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hdac1O09106 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.34■□□□□ 0.53
Hdac1O09106 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Olfr129-201ENSMUST00000122318 993 ntBASIC18.34■□□□□ 0.53
Hdac1O09106 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.34■□□□□ 0.53
Hdac1O09106 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.34■□□□□ 0.53
Hdac1O09106 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.34■□□□□ 0.53
Hdac1O09106 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hdac1O09106 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac1O09106 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.33■□□□□ 0.53
Hdac1O09106 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac1O09106 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac1O09106 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac1O09106 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac1O09106 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac1O09106 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.33■□□□□ 0.52
Hdac1O09106 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Hdac1O09106 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.33■□□□□ 0.52
Hdac1O09106 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.33■□□□□ 0.52
Hdac1O09106 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Hdac1O09106 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.33■□□□□ 0.52
Hdac1O09106 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.33■□□□□ 0.52
Hdac1O09106 Gm18622-201ENSMUST00000219361 595 ntBASIC18.33■□□□□ 0.52
Hdac1O09106 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.33■□□□□ 0.52
Hdac1O09106 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.33■□□□□ 0.52
Hdac1O09106 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac1O09106 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Hdac1O09106 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac1O09106 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms