Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Ebf3O08791 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Ebf3O08791 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16■□□□□ 0.15
Ebf3O08791 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Ebf3O08791 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Gm17271-201ENSMUST00000165535 355 ntBASIC16■□□□□ 0.15
Ebf3O08791 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ebf3O08791 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16■□□□□ 0.15
Ebf3O08791 Chchd1-203ENSMUST00000224633 557 ntBASIC16■□□□□ 0.15
Ebf3O08791 AC147366.1-201ENSMUST00000227671 852 ntBASIC16■□□□□ 0.15
Ebf3O08791 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Grk6-207ENSMUST00000225925 2769 ntBASIC16■□□□□ 0.15
Ebf3O08791 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ebf3O08791 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ebf3O08791 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ebf3O08791 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Ebf3O08791 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.99■□□□□ 0.15
Ebf3O08791 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.99■□□□□ 0.15
Ebf3O08791 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Prob1-201ENSMUST00000097619 3021 ntBASIC15.99■□□□□ 0.15
Ebf3O08791 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.99■□□□□ 0.15
Ebf3O08791 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.99■□□□□ 0.15
Ebf3O08791 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.99■□□□□ 0.15
Ebf3O08791 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.99■□□□□ 0.15
Ebf3O08791 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ebf3O08791 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Ebf3O08791 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.99■□□□□ 0.15
Ebf3O08791 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ebf3O08791 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Ebf3O08791 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.98■□□□□ 0.15
Ebf3O08791 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ebf3O08791 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ebf3O08791 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.98■□□□□ 0.15
Ebf3O08791 Gm7787-201ENSMUST00000216858 688 ntBASIC15.98■□□□□ 0.15
Ebf3O08791 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ebf3O08791 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
Ebf3O08791 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.98■□□□□ 0.15
Ebf3O08791 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ebf3O08791 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ebf3O08791 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms