Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm3139J3QK78 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm3139J3QK78 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm3139J3QK78 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm3139J3QK78 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Gm3139J3QK78 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm3139J3QK78 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm3139J3QK78 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Gm3139J3QK78 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm3139J3QK78 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm3139J3QK78 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Gm10499-201ENSMUST00000174094 934 ntBASIC15.34■□□□□ 0.05
Gm3139J3QK78 Mir8117-201ENSMUST00000184773 107 ntBASIC15.34■□□□□ 0.05
Gm3139J3QK78 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.34■□□□□ 0.05
Gm3139J3QK78 Prob1-201ENSMUST00000097619 3021 ntBASIC15.34■□□□□ 0.05
Gm3139J3QK78 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm3139J3QK78 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm3139J3QK78 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gm3139J3QK78 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gm3139J3QK78 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Gm14494-201ENSMUST00000118786 435 ntBASIC15.33■□□□□ 0.04
Gm3139J3QK78 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3139J3QK78 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.32■□□□□ 0.04
Gm3139J3QK78 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm3139J3QK78 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Gm18246-201ENSMUST00000221023 728 ntBASIC15.32■□□□□ 0.04
Gm3139J3QK78 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm3139J3QK78 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3139J3QK78 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3139J3QK78 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3139J3QK78 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3139J3QK78 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3139J3QK78 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3139J3QK78 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3139J3QK78 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3139J3QK78 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms