Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc188F6WEU2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Gm38241-201ENSMUST00000192641 898 ntBASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc188F6WEU2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc188F6WEU2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc188F6WEU2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Gm21854-201ENSMUST00000179901 471 ntBASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Gm27839-201ENSMUST00000184242 106 ntBASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc188F6WEU2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc188F6WEU2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Gm28911-201ENSMUST00000188837 117 ntBASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms