Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube4aE9Q735 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ube4aE9Q735 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ube4aE9Q735 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Gm25287-201ENSMUST00000103846 110 ntBASIC18.45■□□□□ 0.54
Ube4aE9Q735 Gm22918-201ENSMUST00000103855 110 ntBASIC18.45■□□□□ 0.54
Ube4aE9Q735 Gm6973-201ENSMUST00000117080 721 ntBASIC18.45■□□□□ 0.54
Ube4aE9Q735 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.45■□□□□ 0.54
Ube4aE9Q735 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube4aE9Q735 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.44■□□□□ 0.54
Ube4aE9Q735 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.44■□□□□ 0.54
Ube4aE9Q735 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ube4aE9Q735 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.43■□□□□ 0.54
Ube4aE9Q735 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.43■□□□□ 0.54
Ube4aE9Q735 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ube4aE9Q735 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ube4aE9Q735 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube4aE9Q735 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ube4aE9Q735 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Ube4aE9Q735 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube4aE9Q735 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube4aE9Q735 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube4aE9Q735 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ube4aE9Q735 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ube4aE9Q735 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms