Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm43170-201ENSMUST00000199827 612 ntBASIC21.28■■□□□ 1
Scaf11E9PZM7 Gm43703-201ENSMUST00000200523 763 ntBASIC21.28■■□□□ 1
Scaf11E9PZM7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Scaf11E9PZM7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Scaf11E9PZM7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Scaf11E9PZM7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Scaf11E9PZM7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC21.27■■□□□ 1
Scaf11E9PZM7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Scaf11E9PZM7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC21.27■■□□□ 1
Scaf11E9PZM7 Ldb3-207ENSMUST00000227819 1499 ntBASIC21.27■■□□□ 1
Scaf11E9PZM7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC21.27■■□□□ 1
Scaf11E9PZM7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scaf11E9PZM7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scaf11E9PZM7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scaf11E9PZM7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scaf11E9PZM7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC21.27■■□□□ 1
Scaf11E9PZM7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Scaf11E9PZM7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Scaf11E9PZM7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scaf11E9PZM7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm8131-201ENSMUST00000213783 1570 ntBASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm14722-201ENSMUST00000118943 689 ntBASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm9719-201ENSMUST00000162765 543 ntBASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm17150-201ENSMUST00000165577 381 ntBASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 AC158529.1-201ENSMUST00000223618 239 ntBASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Shd-206ENSMUST00000225145 998 ntBASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm15823-201ENSMUST00000064305 670 ntBASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm7669-201ENSMUST00000210184 1603 ntBASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scaf11E9PZM7 Gm5320-201ENSMUST00000207163 1519 ntBASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Gm13233-201ENSMUST00000118760 1443 ntBASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Gm13244-201ENSMUST00000118855 1446 ntBASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Gm42466-201ENSMUST00000202099 1301 ntBASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scaf11E9PZM7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
Scaf11E9PZM7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scaf11E9PZM7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scaf11E9PZM7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms