Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.53□□□□□ -0.56
Col6a5A6H584 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.53□□□□□ -0.56
Col6a5A6H584 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm8318-201ENSMUST00000182954 872 ntBASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm27701-201ENSMUST00000184498 110 ntBASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col6a5A6H584 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Col6a5A6H584 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Col6a5A6H584 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm12390-201ENSMUST00000117897 397 ntBASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm14723-201ENSMUST00000118686 215 ntBASIC11.53□□□□□ -0.56
Col6a5A6H584 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Col6a5A6H584 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.53□□□□□ -0.56
Col6a5A6H584 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.53□□□□□ -0.56
Col6a5A6H584 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Gm9797-201ENSMUST00000052902 613 ntBASIC11.53□□□□□ -0.56
Col6a5A6H584 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a5A6H584 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a5A6H584 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.52□□□□□ -0.56
Col6a5A6H584 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a5A6H584 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a5A6H584 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a5A6H584 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a5A6H584 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.52□□□□□ -0.57
Col6a5A6H584 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.52□□□□□ -0.57
Col6a5A6H584 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a5A6H584 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.52□□□□□ -0.57
Col6a5A6H584 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.52□□□□□ -0.57
Col6a5A6H584 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a5A6H584 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.52□□□□□ -0.57
Col6a5A6H584 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Col6a5A6H584 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col6a5A6H584 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.52□□□□□ -0.57
Col6a5A6H584 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.52□□□□□ -0.57
Col6a5A6H584 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.52□□□□□ -0.57
Col6a5A6H584 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a5A6H584 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.51□□□□□ -0.57
Col6a5A6H584 Haglr-201ENSMUST00000100000 2085 ntBASIC11.51□□□□□ -0.57
Col6a5A6H584 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.51□□□□□ -0.57
Col6a5A6H584 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.51□□□□□ -0.57
Col6a5A6H584 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.51□□□□□ -0.57
Col6a5A6H584 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.51□□□□□ -0.57
Col6a5A6H584 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.51□□□□□ -0.57
Col6a5A6H584 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.51□□□□□ -0.57
Col6a5A6H584 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a5A6H584 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a5A6H584 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms