Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Gm5161-201ENSMUST00000075243 853 ntBASIC12.42□□□□□ -0.42
Chd6A3KFM7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.42□□□□□ -0.42
Chd6A3KFM7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.42□□□□□ -0.42
Chd6A3KFM7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.41□□□□□ -0.42
Chd6A3KFM7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.41□□□□□ -0.42
Chd6A3KFM7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Gm16026-204ENSMUST00000162652 683 ntBASIC12.41□□□□□ -0.42
Chd6A3KFM7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Gm23931-201ENSMUST00000103842 109 ntBASIC12.41□□□□□ -0.42
Chd6A3KFM7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.41□□□□□ -0.42
Chd6A3KFM7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd6A3KFM7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.4□□□□□ -0.42
Chd6A3KFM7 Gm9182-201ENSMUST00000217829 639 ntBASIC12.4□□□□□ -0.42
Chd6A3KFM7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Gm5356-201ENSMUST00000093326 615 ntBASIC12.4□□□□□ -0.42
Chd6A3KFM7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.4□□□□□ -0.42
Chd6A3KFM7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chd6A3KFM7 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.4□□□□□ -0.42
Chd6A3KFM7 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.4□□□□□ -0.42
Chd6A3KFM7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd6A3KFM7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Gm9719-201ENSMUST00000162765 543 ntBASIC12.39□□□□□ -0.43
Chd6A3KFM7 Mir8109-201ENSMUST00000184375 117 ntBASIC12.39□□□□□ -0.43
Chd6A3KFM7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms