Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim17A0A504 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.02□□□□□ -0.16
Smim17A0A504 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim17A0A504 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim17A0A504 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Smim17A0A504 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Smim17A0A504 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Smim17A0A504 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smim17A0A504 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.02□□□□□ -0.17
Smim17A0A504 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.02□□□□□ -0.17
Smim17A0A504 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.02□□□□□ -0.17
Smim17A0A504 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim17A0A504 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smim17A0A504 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Smim17A0A504 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.01□□□□□ -0.17
Smim17A0A504 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Gm12896-201ENSMUST00000118430 226 ntBASIC14.01□□□□□ -0.17
Smim17A0A504 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.01□□□□□ -0.17
Smim17A0A504 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.01□□□□□ -0.17
Smim17A0A504 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Smim17A0A504 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smim17A0A504 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim17A0A504 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smim17A0A504 Zfp264-201ENSMUST00000208656 1563 ntBASIC14□□□□□ -0.17
Smim17A0A504 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smim17A0A504 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Smim17A0A504 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Smim17A0A504 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14□□□□□ -0.17
Smim17A0A504 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14□□□□□ -0.17
Smim17A0A504 Gm37179-201ENSMUST00000194862 823 ntBASIC14□□□□□ -0.17
Smim17A0A504 Il3ra-202ENSMUST00000223589 738 ntBASIC14□□□□□ -0.17
Smim17A0A504 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smim17A0A504 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smim17A0A504 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim17A0A504 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim17A0A504 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smim17A0A504 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.99□□□□□ -0.17
Smim17A0A504 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.99□□□□□ -0.17
Smim17A0A504 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smim17A0A504 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim17A0A504 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smim17A0A504 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim17A0A504 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms