Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.86□□□□□ -0.35
Lnp1A0A1B0GSK3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.86□□□□□ -0.35
Lnp1A0A1B0GSK3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lnp1A0A1B0GSK3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lnp1A0A1B0GSK3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lnp1A0A1B0GSK3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lnp1A0A1B0GSK3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lnp1A0A1B0GSK3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lnp1A0A1B0GSK3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lnp1A0A1B0GSK3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lnp1A0A1B0GSK3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lnp1A0A1B0GSK3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lnp1A0A1B0GSK3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lnp1A0A1B0GSK3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Lnp1A0A1B0GSK3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lnp1A0A1B0GSK3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm8655-201ENSMUST00000221159 852 ntBASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lnp1A0A1B0GSK3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms