Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm18206-201ENSMUST00000207027 926 ntBASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms