Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm12895-201ENSMUST00000122214 226 ntBASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm7506-201ENSMUST00000207758 815 ntBASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm21362-201ENSMUST00000194272 928 ntBASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms