Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm6376-201ENSMUST00000209407 580 ntBASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm25745-201ENSMUST00000174945 133 ntBASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm36967-201ENSMUST00000193814 266 ntBASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Asic1-205ENSMUST00000228185 1818 ntBASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-1A0A0B4J1P8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.5□□□□□ -0.57
Trbv13-1A0A0B4J1P8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms