Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm27741-201ENSMUST00000185060 237 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44357-201ENSMUST00000195897 142 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm19658-201ENSMUST00000196231 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44367-201ENSMUST00000196836 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44350-201ENSMUST00000197197 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44390-201ENSMUST00000197533 144 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44313-201ENSMUST00000198018 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44486-201ENSMUST00000198508 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44314-201ENSMUST00000199263 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44394-201ENSMUST00000199558 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44484-201ENSMUST00000199873 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44466-201ENSMUST00000200264 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm44359-201ENSMUST00000200671 138 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv30A0A0B4J1P1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm13418-201ENSMUST00000119097 944 ntBASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm6296-201ENSMUST00000222599 943 ntBASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trbv30A0A0B4J1P1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm18195-201ENSMUST00000207604 706 ntBASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv30A0A0B4J1P1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms