Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm3375-201ENSMUST00000203929 796 ntBASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm7370-201ENSMUST00000219471 767 ntBASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trbv3A0A0A6YYE2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv3A0A0A6YYE2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv3A0A0A6YYE2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv3A0A0A6YYE2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm23547-201ENSMUST00000158210 271 ntBASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.89□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms