Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Gm14722-201ENSMUST00000118943 689 ntBASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-4A0A075B6B4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Gm25990-201ENSMUST00000102440 86 ntBASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-4A0A075B6B4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Grk6-207ENSMUST00000225925 2769 ntBASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms