Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Rprl3-201ENSMUST00000157400 290 ntBASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-7A0A075B6B0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-7A0A075B6B0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-7A0A075B6B0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-7A0A075B6B0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-7A0A075B6B0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-7A0A075B6B0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-7A0A075B6B0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-7A0A075B6B0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-7A0A075B6B0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms