Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16A0A075B653 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16A0A075B653 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16A0A075B653 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16A0A075B653 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16A0A075B653 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16A0A075B653 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav16A0A075B653 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16A0A075B653 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.96□□□□□ -0.5
Trav16A0A075B653 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gm16061-201ENSMUST00000122167 857 ntBASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gm20760-201ENSMUST00000179197 648 ntBASIC11.95□□□□□ -0.5
Trav16A0A075B653 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16A0A075B653 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.94□□□□□ -0.5
Trav16A0A075B653 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Gm7213-201ENSMUST00000215977 950 ntBASIC11.94□□□□□ -0.5
Trav16A0A075B653 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16A0A075B653 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms